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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53865333_53866081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53865333 - 53866081

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

TCTCTATTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

GATCTCTAAACA

Flanking Amino Acid:

FTRFCTGLTQIENLFKSKNH

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

81.7

0.71

0.8

76.6

30.9

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

57.8

0.24

1.7

66.62

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029275

53864318 - 53871077

6760

ENSAPLT00000026172

53864379 - 53871856

7478

ENSAPLT00000011409

53864318 - 53871077

6760