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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53868860_53869592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53868860 - 53869592

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACATC

5'SS Class:

major

3'SS Sequence:

CCTAATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATTTCCTAATCT

Flanking Amino Acid:

KTDLNAGNLQGGDDLDPNYV

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

71.2

38.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

72.1

0.5

0.9

65.6

35.6

Minor 5ss

49.4

-0

2.6

68.8

42.2

Minor BPS

65.8

0.57

1.9

86.33

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029275

53864318 - 53871077

6760

ENSAPLT00000026172

53864379 - 53871856

7478

ENSAPLT00000011409

53864318 - 53871077

6760