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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53869748_53870864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53869748 - 53870864

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

ATTACCACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

ACTTTATTACCA

Flanking Amino Acid:

DVIQTGVDNPGHPFIMTVGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

74.8

0.62

1.1

40.5

Major PPT

0.47

0.9

60.3

40.7

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

52.8

0.08

1.9

66.18

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026172

53864379 - 53871856

7478

ENSAPLT00000029275

53864318 - 53871077

6760