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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53878920_53888315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53878920 - 53888315

Intron Length:

9396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACGAGCT

Flanking Amino Acid:

LKPGSIVCESGTGSGSLSHA

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

46.2

-0.2

2.2

74.1

41.8

Associated Gene:

Gene:

TRMT61A

Ensembl Gene ID:

ENSAPLG00000011344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011800

53878556 - 53897896

19341