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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53933414_53934041_F

Intron Information:

Intron Rank:

144179

Intron Class:

major

Intron Phase:

Intron Coordinates:

53933414 - 53934041

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTTCCCTCAGGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

81.8

0.72

0.8

77.8

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

46.5

-0.2

2.1

60.11

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036250

53933396 - 53935623

2228