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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53962575_53963182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53962575 - 53963182

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAATCCC

5'SS Class:

major

3'SS Sequence:

CCGTGTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

CTGCTAATAACG

Flanking Amino Acid:

LLLLLFGRRSGPGFPPAAAL

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.4

41.2

Major BPS

70.1

0.5

70.3

31.9

Major PPT

65.8

0.36

1.1

62.9

42.3

Minor 5ss

35.3

-1.7

46.4

41.8

Minor BPS

-0.5

1.9

50.53

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019723

53961758 - 53969349

7592