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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53963381_53966483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53963381 - 53966483

Intron Length:

3103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

AACTTATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATGCCAAAACT

Flanking Amino Acid:

LGAAERRLPAGQKATLNAEE

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.9

0.63

0.9

74.1

39.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

54.3

0.21

2.1

78.13

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019723

53961758 - 53969349

7592