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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53966575_53969243_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53966575 - 53969243

Intron Length:

2669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGAATCCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

GGCTTTGGAATC

Flanking Amino Acid:

KNFRKHMHYNRDWYKRNFTI

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

0.18

1.2

54.1

44.1

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

42.3

-0.6

1.9

47.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019723

53961758 - 53969349

7592