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Intron Name: Anas_platyrhynchos_platyrhynchos_5_53982431_53998784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53982431 - 53998784

Intron Length:

16354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

TTCTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGTCATGAGAT

Flanking Amino Acid:

AHRPSLQHRAVMMALSNHLN

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

50.9

47.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

86.7

0.83

0.7

84.4

30.6

Minor 5ss

32.3

-2

39.4

45.9

Minor BPS

-0.2

66.43

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006689

53982002 - 54024045

42044