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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54004806_54005416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54004806 - 54005416

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATGTTTTAATA

Flanking Amino Acid:

CKRALEIREKVLGKDHPDVA

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

68.1

42.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.3

0.84

0.8

84.8

35.4

Minor 5ss

41.7

-0.9

3.1

48.1

Minor BPS

62.1

0.38

1.3

65.87

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006689

53982002 - 54024045

42044