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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54005591_54005743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54005591 - 54005743

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GATACCTTTTTT

Flanking Amino Acid:

PNVAKTKNNLASCYLKQGKF

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

83.4

0.75

0.8

81.7

35.4

Minor 5ss

43.9

-0.7

3.2

62.5

43.1

Minor BPS

40.5

-0.6

3.5

66.73

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006689

53982002 - 54024045

42044