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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54005844_54006720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54005844 - 54006720

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

ACTTCTATAAAG

Flanking Amino Acid:

AHEREFGSVDDENKPIWMHA

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

66.3

0.4

1.1

34.4

Major PPT

78.5

0.64

0.9

78.1

35.1

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

52.9

-0

1.8

59.9

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006689

53982002 - 54024045

42044