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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54029686_54031184_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54029686 - 54031184

Intron Length:

1499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

TVELEGVKGINHTWM*

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021316

54029670 - 54044061

14392