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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54032507_54033872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54032507 - 54033872

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAAAT

U12 Branch Point Sequence:

TCAGCCTCAAAT

Flanking Amino Acid:

FSTPVVCINQVTDAVGESEA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

40.1

Major BPS

64.9

0.37

1.1

70.9

31.9

Major PPT

77.6

0.62

0.9

70.2

41.3

Minor 5ss

38.5

-1.3

3.4

55.3

48.9

Minor BPS

54.5

0.22

1.8

70.49

45.8

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021316

54029670 - 54044061

14392

ENSAPLT00000007190

54031181 - 54044061

12881

ENSAPLT00000047272

54031181 - 54044061

12881