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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54034086_54036099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54034086 - 54036099

Intron Length:

2014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TGTTTTGGGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACCTTTTTAATG

Flanking Amino Acid:

NIFVEHAADLDTFHNCITKR

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

68.2

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.5

0.3

1.1

61.8

44.4

Minor 5ss

-1.5

2.7

44.2

38.4

Minor BPS

60.4

0.19

1.3

56.14

40.6

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047272

54031181 - 54044061

12881

ENSAPLT00000021316

54029670 - 54044061

14392

ENSAPLT00000007190

54031181 - 54044061

12881