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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54036255_54041831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54036255 - 54041831

Intron Length:

5577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GTTTCCTTCATT

Flanking Amino Acid:

YPYKYGGLESGAVYVCTEDA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

78.3

0.64

0.8

73.1

30.3

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

73.9

0.84

1.7

88.65

36.5

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007190

54031181 - 54044061

12881

ENSAPLT00000047272

54031181 - 54044061

12881

ENSAPLT00000021316

54029670 - 54044061

14392