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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54043029_54043125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54043029 - 54043125

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

CCTCTAATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTCCTCTAATT

Flanking Amino Acid:

NPRVVAALRKADIKSIKEVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

77.6

0.62

0.9

73.9

34.3

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

0.48

1.6

80.67

34.8

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047272

54031181 - 54044061

12881

ENSAPLT00000021316

54029670 - 54044061

14392