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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54043195_54043850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54043195 - 54043850

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

AGTTAATTAACC

Flanking Amino Acid:

FGRSPAFRARALWQEMDWEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

41.3

Major BPS

67.7

0.44

58.3

38.4

Major PPT

68.6

0.42

58.5

43.1

Minor 5ss

36.7

-1.5

3.3

47.6

Minor BPS

61.3

0.33

1.8

72.52

37.4

Associated Gene:

Gene:

XRCC3

Ensembl Gene ID:

ENSAPLG00000006917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047272

54031181 - 54044061

12881

ENSAPLT00000021316

54029670 - 54044061

14392