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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54069911_54071680_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54069911 - 54071680

Intron Length:

1770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCGATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

TTCTGTGTAACT

Flanking Amino Acid:

SSSTHGRSKSETDWGCVKKS

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

71.5

38.5

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

59.4

0.21

1.1

54.5

41.6

Minor 5ss

40.8

-1

2.8

50.5

Minor BPS

52.2

0.15

2.4

78.9

Associated Gene:

Gene:

PPP1R13B

Ensembl Gene ID:

ENSAPLG00000007222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022954

54059903 - 54129558

69656

ENSAPLT00000007528

54059903 - 54117028

57126

ENSAPLT00000044798

54059903 - 54127984

68082