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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54072794_54074124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54072794 - 54074124

Intron Length:

1331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTTAATA

Flanking Amino Acid:

ELKKLYQELQIRNRLNQEQN

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.92

0.6

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

69.5

0.61

1.2

70.9

Associated Gene:

Gene:

PPP1R13B

Ensembl Gene ID:

ENSAPLG00000007222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027200

54059903 - 54129558

69656

ENSAPLT00000022954

54059903 - 54129558

69656

ENSAPLT00000007528

54059903 - 54117028

57126

ENSAPLT00000044798

54059903 - 54127984

68082