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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54094180_54095692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54094180 - 54095692

Intron Length:

1513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GCTTCACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TGATGCTTCACT

Flanking Amino Acid:

EESPAESNEQSGRQAQNQRN

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

69.5

0.48

73.5

28.6

Major PPT

74.1

0.54

0.8

70.6

35.1

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

56.1

0.27

2.2

77.58

44.5

Associated Gene:

Gene:

PPP1R13B

Ensembl Gene ID:

ENSAPLG00000007222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022954

54059903 - 54129558

69656

ENSAPLT00000007528

54059903 - 54117028

57126

ENSAPLT00000044798

54059903 - 54127984

68082

ENSAPLT00000027200

54059903 - 54129558

69656