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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54142875_54143047_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54142875 - 54143047

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGTAAGT

5'SS Class:

major

3'SS Sequence:

TTCGATGTAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTTGCCATAAAA

Flanking Amino Acid:

TAYTYYKLSYGYTNKITQAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.1

41.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

55.7

0.13

1.2

56.9

42.2

Minor 5ss

28.6

-2.5

3.2

37.2

42.1

Minor BPS

62.6

0.39

1.8

77.86

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020508

54142825 - 54143168

344