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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54167055_54167427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54167055 - 54167427

Intron Length:

373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCTCA

5'SS Class:

major

3'SS Sequence:

AAAATTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCTTGAAAA

Flanking Amino Acid:

DMPIAKHKEEIVSLIESNSV

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.5

36.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

67.4

0.39

1.1

62.6

47.3

Minor 5ss

44.2

-0.6

2.8

57.5

46.7

Minor BPS

70.9

0.65

1.5

81.75

32.8

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680