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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54170436_54174506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54170436 - 54174506

Intron Length:

4071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

LLRTNSQSVKVILMSASINC

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680