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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54183423_54188188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54183423 - 54188188

Intron Length:

4766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CAGTTTTCAAAT

Flanking Amino Acid:

ASKTNCYQRKGRAGRVSNGY

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.8

0.42

1.1

70.7

33.8

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

48.9

-0

1.6

61.85

42.3

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680