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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54188287_54188737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54188287 - 54188737

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

ATAGCATCATCT

Flanking Amino Acid:

IPEKSVPEILCSPLGATVLK

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

57.4

0.18

1.3

65.4

Major PPT

81.4

0.71

0.8

78.2

29.9

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

-0.3

2.1

65.08

44.8

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680