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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54188870_54189565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54188870 - 54189565

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAATTTTAATT

Flanking Amino Acid:

IERTVLHLKELGALTTSVQA

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

0.9

70.5

40.8

Minor 5ss

43.9

-0.7

3.2

65.5

45.8

Minor BPS

65.8

0.58

1.2

75.37

35.4

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680