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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54189729_54189811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54189729 - 54189811

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACAGAA

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATTTTGATT

Flanking Amino Acid:

FGCLEECLIIAAALSLRNIF

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.3

34.5

Major BPS

100

1.24

0.5

100

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

35.3

-1.7

3.4

46.9

48.4

Minor BPS

61.3

0.44

1.2

74.39

37.2

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680