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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54190413_54192225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54190413 - 54192225

Intron Length:

1813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TCTACCTAAATA

Flanking Amino Acid:

DCIATVNAFKAWQICRQRGE

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

78.3

0.64

0.7

77.2

30.8

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

0.4

1.7

71.67

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680