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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54193201_54194249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54193201 - 54194249

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTGGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TAATTTATAACT

Flanking Amino Acid:

NFIHIKKVREVAELFNLLKT

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

69.3

0.43

1.1

63.5

46.2

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

63.3

0.49

1.6

78.69

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680