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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54194367_54195225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54194367 - 54195225

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

TTCATAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATAATT

Flanking Amino Acid:

YLCKQRFILQVVMAGAFYPN

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

100

1.24

0.5

100

Major PPT

78.1

0.63

0.9

74.6

38.9

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

69.5

0.69

1.6

85.41

34.6

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680