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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54197844_54198531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54197844 - 54198531

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

QVKSVLYDGSRAFVEFSHNP

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.7

0.44

1.1

66.1

43.7

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680