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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54198706_54199985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54198706 - 54199985

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCATA

5'SS Class:

strong_major

3'SS Sequence:

ATAAACATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCCATAAAC

Flanking Amino Acid:

HVASTSMESVRVNVDYQKQT

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

79.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.8

0.27

56.8

43.2

Minor 5ss

-0.8

2.9

57.8

46.4

Minor BPS

67.6

0.53

1.7

78.56

35.9

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680