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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54201462_54202708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54201462 - 54202708

Intron Length:

1247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATGCTCTTGATT

Flanking Amino Acid:

ILYVSGDFAEVFFVDYGNRS

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

72.9

34.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

49.2

-0

2.5

63.9

47.7

Minor BPS

63.8

0.52

1.2

73.98

37.1

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680