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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54204562_54204996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54204562 - 54204996

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

CATTTTTATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGGTTTTAACA

Flanking Amino Acid:

ELAEESYKSRQSHDLLQGLF

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

36.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.6

0.62

0.9

35.4

Minor 5ss

47.8

-0.2

2.3

55.2

43.1

Minor BPS

64.5

0.45

1.4

68.54

38.5

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680