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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54206794_54206943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54206794 - 54206943

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTCCT

5'SS Class:

major

3'SS Sequence:

TTTGTGCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TACTTCTTAATT

Flanking Amino Acid:

VAASLSVNANGSTVFLEETS

Intron Amino Acid Position:

1183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

42.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.5

0.53

1.1

68.8

42.1

Minor 5ss

42.5

-0.8

2.9

57.1

41.2

Minor BPS

78.2

0.96

1.1

84.43

36.6

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680