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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54212084_54213366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54212084 - 54213366

Intron Length:

1283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCTGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GTAACTTTGATC

Flanking Amino Acid:

WYEKPYQWNQVDSQHVIDQS

Intron Amino Acid Position:

1323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

0.85

0.9

39.9

Major PPT

70.4

0.46

70.1

40.2

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

59.5

0.28

1.3

63.64

35.9

Associated Gene:

Gene:

TDRD9

Ensembl Gene ID:

ENSAPLG00000007429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007766

54145521 - 54214200

68680