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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54226231_54232109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54226231 - 54232109

Intron Length:

5879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CTTTATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TGTTCTTTATTT

Flanking Amino Acid:

MVQDDKGLAPEANKLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

54.8

44.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

78.6

0.64

82.9

32.2

Minor 5ss

22.7

-3.1

3.2

37.8

Minor BPS

70.4

0.72

1.5

84.38

36.8

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024469

54226212 - 54269072

42861