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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54239028_54240508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54239028 - 54240508

Intron Length:

1481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGAC

5'SS Class:

major

3'SS Sequence:

TTCTATTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GAGTGTTTAATT

Flanking Amino Acid:

GKTVVLTGSQVPIYELQNDG

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.3

35.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

86.7

0.83

0.7

84.9

29.6

Minor 5ss

29.6

-2.3

3.5

40.7

45.8

Minor BPS

57.1

0.3

1.8

69.36

42.2

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024469

54226212 - 54269072

42861

ENSAPLT00000008444

54217730 - 54269072

51343

ENSAPLT00000040501

54231856 - 54269072

37217