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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54241823_54248442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54241823 - 54248442

Intron Length:

6620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCTCTTTAACA

Flanking Amino Acid:

PLANAEVDITINWETVWRAN

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.1

35.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

83.5

0.75

0.8

80.5

30.1

Minor 5ss

41.4

-1

2.9

52.3

38.8

Minor BPS

85.2

1.1

86.93

31.8

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024469

54226212 - 54269072

42861

ENSAPLT00000008444

54217730 - 54269072

51343

ENSAPLT00000040501

54231856 - 54269072

37217