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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54248556_54250032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54248556 - 54250032

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

TGTTTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTTTTTAAAC

Flanking Amino Acid:

RIFPGITAAAVKAFLQPPIE

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.1

35.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

76.9

0.61

74.1

39.5

Minor 5ss

35.9

-1.6

3.3

53.4

43.8

Minor BPS

69.6

0.59

1.3

74.76

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024469

54226212 - 54269072

42861

ENSAPLT00000008444

54217730 - 54269072

51343

ENSAPLT00000040501

54231856 - 54269072

37217