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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54253274_54256246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54253274 - 54256246

Intron Length:

2973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CCTCTGCTAACA

Flanking Amino Acid:

HKLSWEEKRQMLSENLRGEM

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.6

0.69

0.9

76.7

37.4

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

44.2

-0.4

2.3

56.54

42.9

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024469

54226212 - 54269072

42861

ENSAPLT00000008444

54217730 - 54269072

51343

ENSAPLT00000040501

54231856 - 54269072

37217