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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54258563_54264887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54258563 - 54264887

Intron Length:

6325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTCTTTCATA

Flanking Amino Acid:

STPLMNAIKFKHTQVINLLR

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.7

27.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.4

0.53

1.1

75.3

32.6

Minor 5ss

34.5

-1.8

40.8

39.4

Minor BPS

66.4

0.51

1.7

77.18

34.1

Associated Gene:

Gene:

ASPG

Ensembl Gene ID:

ENSAPLG00000008103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040501

54231856 - 54269072

37217

ENSAPLT00000024469

54226212 - 54269072

42861

ENSAPLT00000008444

54217730 - 54269072

51343