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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54334941_54351919_F

Intron Information:

Intron Rank:

42207

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54334941 - 54351919

Intron Length:

16979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGATA

5'SS Class:

major

3'SS Sequence:

CAGGTCAGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCAGAA

U12 Branch Point Sequence:

TTCAGGTCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

39.3

Major BPS

47.4

-0.1

0.9

40.6

30.1

Major PPT

55.3

0.12

1.1

42.4

Minor 5ss

34.8

-1.7

3.3

39.7

46.1

Minor BPS

38.4

-0.8

2.5

60.64

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007057

54334451 - 54399040

64590