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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54352032_54370207_F

Intron Information:

Intron Rank:

42208

Intron Class:

major

Intron Phase:

Intron Coordinates:

54352032 - 54370207

Intron Length:

18176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTTGT

5'SS Class:

major

3'SS Sequence:

TACTTTTATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTACTTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

71.6

40.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.2

0.7

0.9

76.5

36.4

Minor 5ss

40.6

-1.1

3.2

58.8

45.7

Minor BPS

59.2

0.28

1.6

70.07

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007057

54334451 - 54399040

64590