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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54370392_54384284_F

Intron Information:

Intron Rank:

42209

Intron Class:

major

Intron Phase:

Intron Coordinates:

54370392 - 54384284

Intron Length:

13893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGAACTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.9

0.58

69.4

41.3

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

62.3

0.46

1.7

81.73

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007057

54334451 - 54399040

64590