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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54389727_54390278_F

Intron Information:

Intron Rank:

42215

Intron Class:

major

Intron Phase:

Intron Coordinates:

54389727 - 54390278

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGCA

5'SS Class:

major

3'SS Sequence:

TGATCATTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTTAATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

67.1

38.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.8

0.6

0.9

70.1

40.1

Minor 5ss

27.9

-2.5

3.1

33.2

41.8

Minor BPS

50.9

0.11

1.8

72.11

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007057

54334451 - 54399040

64590