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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54390947_54391042_F

Intron Information:

Intron Rank:

42218

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54390947 - 54391042

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCAAAATAA

5'SS Class:

weak_major

3'SS Sequence:

GAGCAGAATAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TAGCCCTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.4

52.2

35.3

Major BPS

73.1

0.58

73.8

32.3

Major PPT

45.5

-0.2

1.1

34.5

38.7

Minor 5ss

28.5

-2.5

4.1

43.2

45.2

Minor BPS

48.7

-0.2

55.54

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007057

54334451 - 54399040

64590