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Intron Name: Anas_platyrhynchos_platyrhynchos_5_54502768_54576121_F

Intron Information:

Intron Rank:

129155

Intron Class:

major

Intron Phase:

Intron Coordinates:

54502768 - 54576121

Intron Length:

73354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTCTCTGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

64.1

0.32

1.1

57.8

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

0.23

1.5

67.57

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040430

54502304 - 54577284

74981