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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5453065_5453875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5453065 - 5453875

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TGGTACACAATC

Flanking Amino Acid:

KKNLDSEQYPVCRLKPWTAW

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

68.5

0.46

73.3

28.9

Major PPT

84.7

0.78

0.7

77.3

31.4

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

45.8

-0.3

1.9

57.74

40.7

Associated Gene:

Gene:

SPON1

Ensembl Gene ID:

ENSAPLG00000006849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010246

5444213 - 5633863

189651

ENSAPLT00000007124

5451750 - 5633863

182114